DNA Binding Motif

						

			
Accessions: MA0377.1 (JASPAR 2024)

			
Names: SFL1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 21
Consensus: wmrmraAtmGAAGaaawawww
Weblogo: 
PSSM: P0      A      C      G      T
01    272    183    130    414      w
02    368    262    124    244      m
03    281    244    332    141      r
04    382    256    117    244      m
05    314     98    349    237      r
06    368    221    198    212      a
07    727     30    124    118      A
08    127    178    108    586      t
09    506    261    226      6      m
10     18     10    960     10      G
11    956     16      5     21      A
12    959      9     21      9      A
13     22     47    806    123      G
14    616    129    218     36      a
15    596    134     36    232      a
16    535    221     48    194      a
17    256    156    146    440      w
18    492     96    217    193      a
19    431     67     99    401      w
20    369    123    146    360      w
21    409    121     72    395      w
Type: Heterodimer
Binding TFs: P20134 (HSF-type DNA-binding)
P20134
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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