DNA Binding Motif

						

			
Accessions: M0674 (AthalianaCistrome v4_May2016)

			
Names: ANAC053.DAP, T12036;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: TTtCTTGkrgarCAAGw
Weblogo: 
PSSM: P0      A      C      G      T
01     19      0      0    579      T
02     73      0     77    448      T
03    139     34     69    356      t
04      0    597      0      1      C
05      1      1     48    548      T
06      0      0      0    598      T
07     14      0    584      0      G
08    128    133    166    171      k
09    204     79    236     79      r
10    126    147    231     94      g
11    356     99    103     40      a
12    397     15    159     27      r
13     11    485     70     32      C
14    598      0      0      0      A
15    504     93      0      1      A
16      0      0    591      7      G
17    217     89     48    244      w
Binding TFs: T12036 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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