DNA Binding Motif

						

			
Accessions: 1jk2_A (3D-footprint 20231221)

			
Names: ZIF268
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Zif268 D20A mutant bound to the GCT DNA site
Length: 8
Consensus: GCGtGGGC
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02      1     76      0     19      C
03      0      0     96      0      G
04     20     19     19     38      t
05      0      0     96      0      G
06      0      0     96      0      G
07      0      0     96      0      G
08      0     96      0      0      C
Binding TFs: 1jk2_A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 1jk2_B
1jk2_C
			
Publications: Miller J.C, Pabo C.O. Rearrangement of side-chains in a Zif268 mutant highlights the complexities of zinc finger-DNA recognition. Journal of molecular biology 313:309-15 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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