DNA Binding Motif

Accessions: 6jhe_A (3D-footprint 20231221)
Names: ECF RNA polymerase sigma factor SigW
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of Bacillus subtilis SigW domain 4 in complexed with -35 element DNA
Length: 6
Consensus: GTtTCA
Weblogo:
PSSM: P0 A C G T
01 0 0 96 0 G
02 0 0 0 96 T
03 13 13 13 57 t
04 0 14 0 82 T
05 0 96 0 0 C
06 68 0 15 13 A
Binding TFs: 6jhe_A (Sigma-70, region 4, Sigma-70, region 4)
Binding Sites: 6jhe_B
6jhe_C
Publications: Kwon E, Devkota SR, Pathak D, Dahal P, Kim DY. Structural analysis of the recognition of the -35 promoter element by SigW from Bacillus subtilis. PLoS One : (2019). [Pubmed]

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