DNA Binding Motif

						

			
Accessions: 1r8d_B (3D-footprint 20231221)

			
Names: transcription activator MtaN
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of MtaN Bound to DNA
Length: 9
Consensus: gCGTnannG
Weblogo: 
PSSM: P0      A      C      G      T
01     17     19     43     17      g
02      0     96      0      0      C
03      0      0     96      0      G
04      0      0      0     96      T
05     24     24     24     24      n
06     52      8     17     19      a
07     24     24     24     24      n
08     24     24     24     24      n
09      8      8     80      0      G
Binding TFs: 1r8d_B (MerR family regulatory protein, MerR, DNA binding, MerR HTH family regulatory protein)
Binding Sites: 1r8d_C
1r8d_D
			
Publications: Newberry K.J, Brennan R.G. The structural mechanism for transcription activation by MerR family member multidrug transporter activation, N terminus. The Journal of biological chemistry 279:20356-62 (2004). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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