DNA Binding Motif

Accessions: 1hcq_E (3D-footprint 20231221)
Names: PROTEIN (ESTROGEN RECEPTOR)
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: THE CRYSTAL STRUCTURE OF THE ESTROGEN RECEPTOR DNA-BINDING DOMAIN BOUND TO DNA: HOW RECEPTORS DISCRIMINATE BETWEEN THEIR RESPONSE ELEMENTS
Length: 5
Consensus: yGaCC
Weblogo:
PSSM: P0 A C G T
01 13 27 13 43 y
02 0 0 96 0 G
03 54 13 16 13 a
04 0 96 0 0 C
05 0 96 0 0 C
Binding TFs: 1hcq_E (Zinc finger, C4 type (two domains))
Binding Sites: 1hcq_G
1hcq_H
Publications: Schwabe J. W. R., Chapman L., Finch J. T., Rhodes D. The crystal structure of the estrogen receptor DNA-binding domain bound to DNA: how receptors discriminate between their response elements. Cell 75:567-578 (1993). [Pubmed]

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