DNA Binding Motif
Accessions: | CtsR (DBTBS 1.0) |
Names: | CtsR |
Organisms: | Bacillus subtilis |
Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
Length: | 17 |
Consensus: | rGTCAAAGAWRGTCAAA |
Weblogo: | |
PSSM: | P0 A C G T 01 0.44 0 0.56 0 r 02 0.08 0 0.92 0 G 03 0 0 0 1 T 04 0 1 0 0 C 05 1 0 0 0 A 06 1 0 0 0 A 07 0.88 0 0 0.12 A 08 0.09 0 0.83 0.09 G 09 0.88 0 0 0.12 A 10 0.28 0 0 0.72 W 11 0.31 0 0.69 0 R 12 0.08 0 0.92 0 G 13 0 0 0 1 T 14 0 1 0 0 C 15 1 0 0 0 A 16 0.78 0 0.22 0 A 17 1 0 0 0 A |
Binding TFs: | CtsR (Firmicute transcriptional repressor of class III stress genes (CtsR)) |
Binding Sites: | clpE_1 clpE_2 clpE_3 clpE_4 clpE_5 clpP_1 ctsR_1 |
Publications: | Derré I, Rapoport G, Devine K, Rose M, Msadek T. ClpE, a novel type of HSP100 ATPase, is part of the CtsR heat shock regulon of Bacillus subtilis. Molecular microbiology 32:581-93 (1999). [Pubmed] Derré I, Rapoport G, Msadek T. CtsR, a novel regulator of stress and heat shock response, controls clp and molecular chaperone gene expression in gram-positive bacteria. Molecular microbiology 31:117-31 (1999). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.