DNA Binding Motif

						

			
Accessions: MA0932.1 (JASPAR 2024)

			
Names: AHL12
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: AAwwwwTT
Weblogo: 
PSSM: P0      A      C      G      T
01    772     18    146     64      A
02    843     35     24     98      A
03    484     14      5    497      w
04    332      6      3    660      w
05    660      3      6    332      w
06    497      5     14    484      w
07     98     24     35    843      T
08     64    146     18    772      T
Type: Heterodimer
Binding TFs: Q8LPN5 (Domain of unknown function (DUF296))
Q8LPN5
			
Publications: Yun J, Kim YS, Jung JH, Seo PJ, Park CM. The AT-hook motif-containing protein AHL22 regulates flowering initiation by modifying FLOWERING LOCUS T chromatin in Arabidopsis. J Biol Chem 287:15307-16 (2012). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.