DNA Binding Motif

						

			
Accessions: 1g2d_F (3D-footprint 20231221)

			
Names: TATA BOX ZINC FINGER PROTEIN
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2)
Length: 11
Consensus: CGCTATAAAAm
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02      0      0     96      0      G
03      0     96      0      0      C
04      0      0      0     96      T
05     96      0      0      0      A
06     19      0      1     76      T
07     96      0      0      0      A
08     96      0      0      0      A
09     96      0      0      0      A
10     96      0      0      0      A
11     38     38      0     20      m
Binding TFs: 1g2d_F (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 1g2d_D
1g2d_E
			
Publications: Wolfe S.A, Grant R.A, Elrod-Erickson M, Pabo C.O. Beyond the "recognition code": structures of two Cys2His2 zinc finger/TATA box complexes. Structure (London, England : 1993) 9:717-23 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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