DNA Binding Motif

Accessions: Dip3 (DrosophilaTF 1.1)
Names: Dip3
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 12
Consensus: cCwsrycwkrcc
Weblogo:
PSSM: P0 A C G T
01 0.04 0.64 0.08 0.24 c
02 0.0385 0.7308 0.0385 0.1923 C
03 0.4615 0.1154 0.1154 0.3077 w
04 0.1923 0.4231 0.3077 0.0769 s
05 0.3462 0.1923 0.2692 0.1923 r
06 0.0769 0.5769 0.0385 0.3077 y
07 0.1154 0.6538 0.0385 0.1923 c
08 0.3462 0.1154 0.1538 0.3846 w
09 0.1923 0.0769 0.2692 0.4615 k
10 0.2692 0.1923 0.3077 0.2308 r
11 0.0769 0.6538 0.0385 0.2308 c
12 0.0476 0.6667 0.1905 0.0952 c
Binding TFs: Dip3 (BESS motif, Alcohol dehydrogenase transcription factor Myb/SANT-like)
Binding Sites: Dip3_1
Dip3_10
Dip3_11
Dip3_12
Dip3_13
Dip3_14
Dip3_15
Dip3_16
Dip3_17
Dip3_18
Dip3_19
Dip3_2
Dip3_20
Dip3_21
Dip3_22
Dip3_23
Dip3_24
Dip3_25
Dip3_26
Dip3_3
Dip3_4
Dip3_5
Dip3_6
Dip3_7
Dip3_8
Dip3_9
Publications: Bhaskar V, Courey A.J. The MADF-BESS domain factor Dip3 potentiates synergistic activation by Dorsal and Twist. Gene 299:173-84 (2002). [Pubmed]

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