DNA Binding Motif

Accessions: M0705 (AthalianaCistrome v4_May2016)
Names: ANAC038.ampDAP, T09752;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: grTwaCkTrtdwyaCAAGwAA
Weblogo:
PSSM: P0 A C G T
01 101 37 213 62 g
02 131 31 171 80 r
03 77 7 6 323 T
04 191 2 70 150 w
05 244 27 78 64 a
06 33 379 0 1 C
07 0 8 182 223 k
08 4 4 0 405 T
09 109 16 269 19 r
10 97 87 23 206 t
11 137 45 114 117 d
12 133 92 70 118 w
13 98 114 65 136 y
14 264 34 52 63 a
15 13 320 48 32 C
16 407 0 2 4 A
17 343 70 0 0 A
18 6 0 405 2 G
19 164 68 30 151 w
20 305 34 6 68 A
21 384 7 1 21 A
Binding TFs: T09752 (No apical meristem (NAM) protein)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.