DNA Binding Motif

Accessions: 3iag_C (3D-footprint 20231221)
Names: Recombining binding protein suppressor of hairless
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CSL (RBP-Jk) bound to HES-1 nonconsensus site
Length: 7
Consensus: TCaCAyG
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 0 96 0 0 C
03 60 12 12 12 a
04 0 96 0 0 C
05 96 0 0 0 A
06 12 48 12 24 y
07 0 0 96 0 G
Binding TFs: 3iag_C (IPT/TIG domain, Beta-trefoil DNA-binding domain, LAG1, DNA binding)
Binding Sites: 3iag_A
3iag_B
Publications: Friedmann D.R, Kovall R.A. Thermodynamic and structural insights into CSL-DNA complexes. Protein science : a publication of the Protein Society 19:34-46 (2010). [Pubmed]

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