DNA Binding Motif

Accessions: 1zaa_C (3D-footprint 20231221)
Names: PROTEIN (ZIF268)
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMS
Length: 10
Consensus: ACGCCCACGC
Weblogo:
PSSM: P0 A C G T
01 68 7 6 15 A
02 3 88 3 2 C
03 8 1 87 0 G
04 0 95 1 0 C
05 0 95 0 1 C
06 7 83 5 1 C
07 82 4 4 6 A
08 3 87 3 3 C
09 6 4 86 0 G
10 5 81 5 5 C
Binding TFs: 1zaa_C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 1zaa_A
1zaa_B
Publications: Pavletich N. P., Pablo C. O. Zinc finger-DNA recognition: Crystal structure of a Zif268-DNA complex at 2.1 A. Science 252:809-816 (1991). [Pubmed]

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