DNA Binding Motif

Accessions: 1zaa_C (3D-footprint 20210203)
Names: PROTEIN (ZIF268)
Organisms: Mus musculus
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMS
Length: 10
Consensus: ACGCCCACGC
Weblogo:
PSSM: P0 A C G T
01 68 7 6 15 A
02 3 88 3 2 C
03 8 1 87 0 G
04 0 95 1 0 C
05 0 95 0 1 C
06 7 83 5 1 C
07 82 4 4 6 A
08 3 87 3 3 C
09 6 4 86 0 G
10 5 81 5 5 C
Binding TFs: 1zaa_C (C2H2-type zinc finger, Zinc finger, C2H2 type, Zinc-finger double domain)
Binding Sites: 1zaa_A
1zaa_B
Publications: Pavletich N. P., Pablo C. O. Zinc finger-DNA recognition: Crystal structure of a Zif268-DNA complex at 2.1 A. Science 252:809-816 (1991). [Pubmed]

Disclaimer

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research.