DNA Binding Motif

						

			
Accessions: MA0481.2 (JASPAR 2024)

			
Names: FOXP1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: awGTAAACAgaw
Weblogo: 
PSSM: P0      A      C      G      T
01   1499    908    993    866      a
02   1535    267    963   1501      w
03    297     50   3858     61      G
04    136    152    103   3875      T
05   4081    130     28     27      A
06   4034    142     18     72      A
07   4165     20     56     25      A
08     38   3977     30    221      C
09   4105     14     37    110      A
10    904    679   2172    511      g
11   1508    863    935    960      a
12   1303    941    906   1116      w
Type: Heterodimer
Binding TFs: Q9H334 (Fork head domain)
Q9H334
Binding Sites: MA0481.2.1
MA0481.2.10
MA0481.2.11
MA0481.2.12
MA0481.2.13
MA0481.2.14
MA0481.2.15
MA0481.2.16
MA0481.2.17
MA0481.2.18
MA0481.2.19
MA0481.2.2
MA0481.2.20
MA0481.2.3
MA0481.2.4
MA0481.2.5
MA0481.2.6
MA0481.2.7
MA0481.2.8
MA0481.2.9
			
Publications: Gabut M, Samavarchi-Tehrani P, Wang X, Slobodeniuc V, O'Hanlon D, Sung H.K, Alvarez M, Talukder S, Pan Q, Mazzoni E.O, Nedelec S, Wichterle H, Woltjen K, Hughes T.R, Zandstra P.W, Nagy A, Wrana J.L, Blencowe B.J. An alternative splicing switch regulates embryonic stem cell pluripotency and reprogramming. Cell 147:132-46 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.