DNA Binding Motif

						

			
Accessions: MF0001.1 (JASPAR 2024)

			
Names: ETS class
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: METAMODEL
Length: 8
Consensus: aCcGGAAg
Weblogo: 
PSSM: P0      A      C      G      T
01 61.750  8.490 15.180 14.580      a
02 10.410 68.200 17.270  4.130      C
03 22.860 65.250  8.300  3.590      c
04  1.920  0.500 94.770  2.810      G
05  1.550  0.350 97.320  0.780      G
06 98.600  0.250  0.870  0.280      A
07 86.660  2.570      0 10.770      A
08 23.490  8.710     64  3.800      g
			
Publications: Sandelin A, Wasserman W.W. Constrained binding site diversity within families of transcription factors enhances pattern discovery bioinformatics. Journal of molecular biology 338:207-15 (2004). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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