DNA Binding Motif

						

			
Accessions: FlhDC (RegulonDB 7.5)

			
Names: FlhDC
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 16
Consensus: SyTwwTTmsgsCswTw
Weblogo: 
PSSM: P0      A      C      G      T
01      0      4     11      1      S
02      1      7      3      5      y
03      0      2      3     11      T
04      7      0      0      9      w
05      6      1      0      9      w
06      2      2      0     12      T
07      0      1      0     15      T
08      5      8      0      3      m
09      2      5      6      3      s
10      2      3     10      1      g
11      3      5      8      0      s
12      0     13      3      0      C
13      1      5      8      2      s
14      8      0      0      8      w
15      0      1      0     15      T
16      4      1      1     10      w
Binding TFs: ECK120004790 (Flagellar transcriptional activator (FlhD))
Binding Sites: ECK120011334
ECK120011336
ECK120016598
ECK120016600
ECK120016602
ECK120016606
ECK120016608
ECK120016610
ECK120016612
ECK120016614
ECK120016733
ECK120016735
ECK120016737
ECK120016739
ECK120016742
ECK120016745
ECK120016747
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.