DNA Binding Motif

Accessions: 1gau_A (3D-footprint 20231221)
Names: ERYTHROID TRANSCRIPTION FACTOR GATA-1
Organisms: Gallus gallus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR
Length: 5
Consensus: aGATa
Weblogo:
PSSM: P0 A C G T
01 45 16 16 19 a
02 8 8 72 8 G
03 74 7 7 8 A
04 10 10 10 66 T
05 60 12 12 12 a
Binding TFs: 1gau_A (GATA zinc finger)
Binding Sites: 1gau_B
1gau_C
Publications: Omichinski J. G., Clore G. M., Schaad O., Felsenfeld G., Trainor C., Appella E., Stahl S. J., Gronenborn A. M. NMR structure of a specific DNA complex of Zn-containing DNA binding domain of GATA-1.. Science 261:438-446 (1993). [Pubmed]

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