DNA Binding Motif

						

			
Accessions: M0828 (AthalianaCistrome v4_May2016)

			
Names: T08491;, WRKY43.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: waaaAAAGTCAACGm
Weblogo: 
PSSM: P0      A      C      G      T
01    242    119     75    153      w
02    225    104    125    135      a
03    251    110    115    113      a
04    321     89     88     91      a
05    423     33     42     91      A
06    423     41     21    104      A
07    467      0    122      0      A
08      0      0    589      0      G
09      0      0      0    589      T
10      0    589      0      0      C
11    589      0      0      0      A
12    589      0      0      0      A
13     71    498      0     20      C
14     83     42    419     45      G
15    188    160    118    123      m
Binding TFs: T08491 (WRKY DNA -binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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