DNA Binding Motif
| Accessions: | UP00581A_2 (UniPROBE 20160601) |
| Names: | vascular plant one zinc finger protein 2, VOZ2 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 13 |
| Consensus: | hdAGTCAACGyhr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.29 0.31 0.11 0.29 h 02 0.30 0.17 0.27 0.27 d 03 0.75 0.01 0.24 0 A 04 0 0 0.99 0.01 G 05 0 0 0 0.99 T 06 0.01 0.99 0 0 C 07 0.98 0.01 0 0.01 A 08 0.98 0 0.02 0 A 09 0.01 0.98 0.01 0.01 C 10 0.03 0.01 0.95 0.02 G 11 0.21 0.39 0.14 0.26 y 12 0.29 0.27 0.12 0.33 h 13 0.27 0.23 0.37 0.13 r |
| Binding TFs: | UP00581A |
| Binding Sites: | CCCCACCC GCGTACGC TTACGCAA AACGCAAC AACGCTAC ACGCAACC ACGCAACT ACGCAATC ACGCTAAC ACGCTACC ACGCTACT ATAGCGTA CACGCAAC GTACGCAA GTACGCTA GTAGCGTA GTCGCGTA GTTGCGTA TAGCGTAA TAGCGTCA |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.