DNA Binding Motif

Accessions: RVE1_2 (ArabidopsisPBM 20140210)
Names: RVE1
Organisms: Arabidopsis thaliana
Libraries: ArabidopsisPBM 20140210 1
1 Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed]
Length: 10
Consensus: smatATCwaw
Weblogo:
PSSM: P0 A C G T
01 0.2038 0.3055 0.2886 0.2020 s
02 0.5464 0.3092 0.0369 0.1075 m
03 0.6523 0.0891 0.1565 0.1020 a
04 0.2328 0.0267 0.1511 0.5894 t
05 0.9090 0.0410 0.0306 0.0194 A
06 0.0251 0.0261 0.0367 0.9120 T
07 0.0599 0.8901 0.0364 0.0136 C
08 0.2974 0.1988 0.0462 0.4576 w
09 0.6087 0.1645 0.1319 0.0950 a
10 0.4951 0.1575 0.0650 0.2825 w
Binding TFs: RVE1 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Publications: Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed]

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