DNA Binding Motif

						

			
Accessions: M0274 (AthalianaCistrome v4_May2016)

			
Names: OBP3.ampDAP, T16682;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: tttwttytttwaCTTTTtk
Weblogo: 
PSSM: P0      A      C      G      T
01    123    119     76    282      t
02    142    113     59    286      t
03    120     93     84    303      t
04    154     85     23    338      w
05    115     99     75    311      t
06    117     99     82    302      t
07    111    152     47    290      y
08     87     87     68    358      t
09     84     77     93    346      t
10     67    136     18    379      t
11    182     78     47    293      w
12    228    114    115    143      a
13      0    600      0      0      C
14      0      9      0    591      T
15      0      1      0    599      T
16      0      0      0    600      T
17     93     44     23    440      T
18     77     81     65    377      t
19    144    138    156    162      k
Binding TFs: T16682 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.