DNA Binding Motif

Accessions: M0538 (AthalianaCistrome v4_May2016)
Names: MYB13.ampDAP, T06015;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 18
Consensus: yyCACCwACCmhwwhhhh
Weblogo:
PSSM: P0 A C G T
01 72 201 77 238 y
02 53 285 21 229 y
03 5 456 0 127 C
04 588 0 0 0 A
05 31 556 1 0 C
06 0 588 0 0 C
07 339 3 0 246 w
08 587 0 0 1 A
09 125 463 0 0 C
10 0 506 0 82 C
11 297 151 53 87 m
12 161 196 39 192 h
13 210 145 71 162 w
14 180 143 99 166 w
15 166 162 85 175 h
16 180 184 62 162 h
17 183 155 82 168 h
18 152 174 80 182 h
Binding TFs: T06015 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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