DNA Binding Motif

						

			
Accessions: M0455 (AthalianaCistrome v4_May2016)

			
Names: HSFB3.ampDAP, T08630;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 13
Consensus: AAgcTTCTAGAAg
Weblogo: 
PSSM: P0      A      C      G      T
01    436     21     53     47      A
02    498      4      0     55      A
03     65     98    313     81      g
04     51    332    114     60      c
05     29      0      5    523      T
06      1      0      4    552      T
07      0    551      1      5      C
08      0    111     27    419      T
09    501      6     44      6      A
10     91     10    397     59      G
11    500      0     34     23      A
12    447     17     35     58      A
13    129    105    232     91      g
Binding TFs: T08630 (HSF-type DNA-binding)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.