DNA Binding Motif

						

			
Accessions: M0458 (AthalianaCistrome v4_May2016)

			
Names: HSFA6A.DAP, T25654;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: GAAgmTTCTAGAAgmw
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0    580      0      G
02    577      0      0      3      A
03    545      4      4     27      A
04     41    140    332     67      g
05    185    153    108    134      m
06     50     20      2    508      T
07      3      0      2    575      T
08      0    579      1      0      C
09      1     80     22    477      T
10    456     17    107      0      A
11      0      1    579      0      G
12    572      0      0      8      A
13    451     16     50     63      A
14    138    117    223    102      g
15    186    190     87    117      m
16    198     66     73    243      w
Binding TFs: T25654 (HSF-type DNA-binding)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.