DNA Binding Motif

						

			
Accessions: M0441 (AthalianaCistrome v4_May2016)

			
Names: HAT5.ampDAP, T14465;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: wwcAATAATTgaww
Weblogo: 
PSSM: P0      A      C      G      T
01    258     72     62    179      w
02    161    140     91    179      w
03     62    374      0    135      c
04    571      0      0      0      A
05    571      0      0      0      A
06      0      0      0    571      T
07    543     10     18      0      A
08    571      0      0      0      A
09      0      0      0    571      T
10     14      0     42    515      T
11    132     69    333     37      g
12    319     56     63    133      a
13    212     64    122    173      w
14    156    107    131    177      w
Binding TFs: T14465 (Homeobox domain, Homeobox associated leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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