DNA Binding Motif

						

			
Accessions: M0286 (AthalianaCistrome v4_May2016)

			
Names: GATA1.ampDAP, T13696;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 14
Consensus: rrwyyrGATCTrrr
Weblogo: 
PSSM: P0      A      C      G      T
01    186     90    244     71      r
02    348     43    173     27      r
03    254     15     36    286      w
04     45    213     19    314      y
05      0    296     17    278      y
06    358     57    176      0      r
07      7      0    584      0      G
08    591      0      0      0      A
09      0      0      0    591      T
10      0    590      0      1      C
11     13     69     33    476      T
12    211     46    255     79      r
13    269     80    161     81      r
14    266     63    148    114      r
Binding TFs: T13696 (GATA zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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