DNA Binding Motif

						

			
Accessions: M0270 (AthalianaCistrome v4_May2016)

			
Names: At4g38000.DAP, T19974;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 28
Consensus: wtttttwtttttttttttTwwCTTTTTw
Weblogo: 
PSSM: P0      A      C      G      T
01    149    139     56    225      w
02    126    100     38    305      t
03     90     91     56    332      t
04     96     96     28    349      t
05     85    105     24    355      t
06     94    101     36    338      t
07    145    108     27    289      w
08    126     87     62    294      t
09    112     89     72    296      t
10     95    138     18    318      t
11     86     92     34    357      t
12     93     87     33    356      t
13     93    101     32    343      t
14    128    102     57    282      t
15    119    114     57    279      t
16     91    100     50    328      t
17     98     59     37    375      t
18     91     55     56    367      t
19     36    109      2    422      T
20    210     42     28    289      w
21    289     62     71    147      w
22      0    516      1     52      C
23     11     19      0    539      T
24      0     25      0    544      T
25      0      2      0    567      T
26    129     14      0    426      T
27     46     60     27    436      T
28    146    117     88    218      w
Binding TFs: T19974 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.