DNA Binding Motif

						

			
Accessions: M0254 (AthalianaCistrome v4_May2016)

			
Names: At3g45610.ampDAP, T15148;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: ttttttwmCTTTTTs
Weblogo: 
PSSM: P0      A      C      G      T
01    135    122     98    245      t
02    148     76     76    300      t
03    129    113     58    300      t
04    132     70     87    311      t
05    119     55    101    325      t
06     39    128     26    407      t
07    206    101     70    223      w
08    260    198     83     59      m
09      0    600      0      0      C
10      0      1      0    599      T
11      0      0      0    600      T
12      0      0      0    600      T
13    138      0      2    460      T
14     13     61     28    498      T
15     67    196    222    115      s
Binding TFs: T15148 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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