DNA Binding Motif

						

			
Accessions: M0601 (AthalianaCistrome v4_May2016)

			
Names: At1g49010.ampDAP, T04596;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: dwwdwrGATAAGrwt
Weblogo: 
PSSM: P0      A      C      G      T
01    185     68    178    166      d
02    280     41    102    174      w
03    254     25     32    286      w
04    163     66    213    155      d
05    229     82     50    236      w
06    185      4    350     58      r
07      0      0    597      0      G
08    595      2      0      0      A
09      0      0      0    597      T
10    578      0     16      3      A
11    592      0      2      3      A
12     12     55    469     61      G
13    212     45    309     31      r
14    171     45     28    353      w
15    147     61     73    316      t
Binding TFs: T04596 (Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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