DNA Binding Motif

						

			
Accessions: M0056 (AthalianaCistrome v4_May2016)

			
Names: At1g22810.ampDAP, T01956;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: cdyCACCGACAmhrm
Weblogo: 
PSSM: P0      A      C      G      T
01    115    279     72    130      c
02    164     58    196    178      d
03     38    315     86    157      y
04     18    566      2     10      C
05    538      0     58      0      A
06      0    596      0      0      C
07      0    596      0      0      C
08      0      0    596      0      G
09    475     76      3     42      A
10      0    596      0      0      C
11    442     54     79     21      A
12    191    214     54    137      m
13    175    172     91    158      h
14    170    103    175    148      r
15    164    197    114    121      m
Binding TFs: T01956 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.