DNA Binding Motif

						

			
Accessions: M0583 (AthalianaCistrome v4_May2016)

			
Names: AT5G56840.ampDAP, T24159;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: wwwwwycTTATCCAww
Weblogo: 
PSSM: P0      A      C      G      T
01    169    138     59    233      w
02    224    100     72    203      w
03    200     93     56    250      w
04    296     65     55    183      w
05    336     43     60    160      w
06     48    307     46    198      y
07    128    328     64     79      c
08     18     17      0    564      T
09     12      0      2    585      T
10    599      0      0      0      A
11      0      0      0    599      T
12      0    599      0      0      C
13      1    473      2    123      C
14    409     10     54    126      A
15    202    104     23    270      w
16    300     20     20    259      w
Binding TFs: T24159 (Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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