DNA Binding Motif

						

			
Accessions: M0403 (AthalianaCistrome v4_May2016)

			
Names: AT4G00250.DAP, T18548;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 13
Consensus: wwycTTATCCAww
Weblogo: 
PSSM: P0      A      C      G      T
01    291     76     61    164      w
02    327     31     85    149      w
03     52    320     48    172      y
04    113    368     62     49      c
05      5     33      0    554      T
06      8      5     14    565      T
07    592      0      0      0      A
08      0      0      0    592      T
09      0    592      0      0      C
10      0    544      0     48      C
11    432      1    119     40      A
12    164    126     31    271      w
13    244     18     12    318      w
Binding TFs: T18548 (Protein of unknown function, DUF573)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.