DNA Binding Motif

						

			
Accessions: M0245 (AthalianaCistrome v4_May2016)

			
Names: AT2G28810.ampDAP, T09933;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: ttyaCTTTWTsyttt
Weblogo: 
PSSM: P0      A      C      G      T
01     82     80    121    317      t
02     57    124     48    371      t
03    116    154     57    273      y
04    277    137    110     76      a
05      0    600      0      0      C
06      0     38      0    562      T
07      0      0      0    600      T
08      0      0      0    600      T
09    151      0      0    449      W
10      8     78      1    513      T
11    102    185    195    118      s
12    126    167     94    213      y
13     95    143    106    256      t
14     95    140     60    305      t
15    132     87     45    336      t
Binding TFs: T09933 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.