DNA Binding Motif

						

			
Accessions: M0147 (AthalianaCistrome v4_May2016)

			
Names: AT2G17410.DAP, T07781;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: AAwwtrAAATYAAwW
Weblogo: 
PSSM: P0      A      C      G      T
01    319     29     49     57      A
02    324     41     19     70      A
03    256     29      6    163      w
04    122     26     20    286      w
05    100     89     30    235      t
06    173     72    125     84      r
07    362     32      0     60      A
08    443      3      8      0      A
09    445      0      0      9      A
10      0      0      0    454      T
11      0    119      0    335      Y
12    352      0    102      0      A
13    424      5     25      0      A
14    243      0     10    201      w
15    122     14      8    310      W
Binding TFs: T07781 (ARID/BRIGHT DNA binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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