DNA Binding Motif

						

			
Accessions: M0273 (AthalianaCistrome v4_May2016)

			
Names: AT1G69570.ampDAP, T02984;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: aaaaaaaaaAaaraAAAAGtr
Weblogo: 
PSSM: P0      A      C      G      T
01    248     98    103    149      a
02    285     81     93    139      a
03    343     88    100     67      a
04    343     60     86    109      a
05    304     86    138     70      a
06    312     67     94    125      a
07    313     56    146     83      a
08    307     51    148     92      a
09    375     38     81    104      a
10    428     24     81     65      A
11    399     55     88     56      a
12    333     57    132     76      a
13    172     86    260     80      r
14    350     78     92     78      a
15    430     16     25    127      A
16    598      0      0      0      A
17    598      0      0      0      A
18    586      0     12      0      A
19      0      0    598      0      G
20     51    110     90    347      t
21    203     24    292     79      r
Binding TFs: T02984 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.