DNA Binding Motif

						

			
Accessions: MA1105.1 (JASPAR 2024)

			
Names: GRHL2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: ghmaAACCAGTTytd
Weblogo: 
PSSM: P0      A      C      G      T
01   3012   2095   6090   2180      g
02   3968   3632   2222   3555      h
03   4085   5399   1985   1908      m
04   8954   1447   1278   1698      a
05  11942    185    708    542      A
06  12266    173    468    470      A
07    113  12992    164    108      C
08    864  11548    309    656      C
09   9785    330   1190   2072      A
10     72    227  12955    123      G
11    488    551    224  12114      T
12    660    989    286  11442      T
13   2339   3538   1893   5607      y
14   2912   2666   3245   4554      t
15   3378   2411   3672   3916      d
Type: Heterodimer
Binding TFs: Q6ISB3 (CP2 transcription factor)
Q6ISB3
Binding Sites: MA1105.1.1
MA1105.1.10
MA1105.1.11
MA1105.1.12
MA1105.1.13
MA1105.1.14
MA1105.1.15
MA1105.1.16
MA1105.1.17
MA1105.1.18
MA1105.1.19
MA1105.1.2
MA1105.1.20
MA1105.1.3
MA1105.1.4
MA1105.1.5
MA1105.1.6
MA1105.1.7
MA1105.1.8
MA1105.1.9
			
Publications: Werth M, Walentin K, Aue A, Schönheit J, Wuebken A, Pode-Shakked N, Vilianovitch L, Erdmann B, Dekel B, Bader M, Barasch J, Rosenbauer F, Luft FC, Schmidt-Ott KM. The transcription factor grainyhead-like 2 regulates the molecular composition of the epithelial apical junctional complex. Development 137:3835-45 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.