DNA Binding Motif

Accessions: JDP2_full_2 (HumanTF 1.0), MA0656.1 (JASPAR 2024)
Names: JDP2, JDP2(var.2)
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1, JASPAR 2024 2
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 3, HT-SELEX
Length: 12
Consensus: gATGACGTCAyc
Weblogo:
PSSM: P0 A C G T
01 4260 5483 11036 3623 g
02 24403 1319 1403 17 A
03 3 9 3 24403 T
04 11 0 24403 1939 G
05 24403 7 6 6 A
06 5 24403 6 338 C
07 587 5 24403 2 G
08 15 24 7 24403 T
09 1777 24403 4 1 C
10 24403 10 9 0 A
11 47 12119 835 12283 y
12 4383 12117 4124 3778 c
Type: Heterodimer
Binding TFs: JDP2_full (bZIP transcription factor, Basic region leucine zipper)
Q8WYK2 (bZIP transcription factor, Basic region leucine zipper)
Q8WYK2
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

Aronheim A., Zandi E., Hennemann H., Elledge S. J., Karin M. Isolation of an AP-1 repressor by a novel method for detecting protein-protein interactions.. Mol. Cell. Biol. 17:3094-3102 (1997). [Pubmed]

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