DNA Binding Motif

Accessions: 1r0n_B (3D-footprint 20231221)
Names: Ecdysone receptor
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of Heterodimeric Ecdsyone receptor DNA binding complex
Length: 5
Consensus: TgaCC
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 16 13 54 13 g
03 54 13 16 13 a
04 0 96 0 0 C
05 0 96 0 0 C
Binding TFs: 1r0n_B (Zinc finger, C4 type (two domains))
Binding Sites: 1r0n_C
1r0n_D
Publications: Devarakonda S, Harp J.M, Kim Y, Ozyhar A, Rastinejad F. Structure of the heterodimeric ecdysone receptor DNA-binding complex. The EMBO journal 22:5827-40 (2003). [Pubmed]

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