DNA Binding Motif

						

			
Accessions: MA0936.1 (JASPAR 2024)

			
Names: NAC046, T11I18.17
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: ayACGcmA
Weblogo: 
PSSM: P0      A      C      G      T
01    544    217     80    159      a
02     66    630     38    267      y
03    813    120     43     24      A
04    102    858     24     16      C
05     94     49    812     45      G
06    143    565    112    180      c
07    459    402     48     91      m
08    805     40     96     59      A
Type: Heterodimer
Binding TFs: Q9SQQ6 (No apical meristem (NAM) protein)
Q9SQQ6
			
Publications: Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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