DNA Binding Motif

						

			
Accessions: 2fo1_A (3D-footprint 20231221)

			
Names: Lin-12 and glp-1 phenotype protein 1, isoform b
Organisms: Caenorhabditis elegans
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of the CSL-Notch-Mastermind ternary complex bound to DNA
Length: 7
Consensus: TTCnCAC
Weblogo: 
PSSM: P0      A      C      G      T
01      9     11      9     67      T
02      0      0      0     96      T
03     11     67      9      9      C
04     24     24     24     24      n
05      0     96      0      0      C
06     96      0      0      0      A
07      9     67     11      9      C
Binding TFs: 2fo1_A (IPT/TIG domain, Beta-trefoil DNA-binding domain, LAG1, DNA binding)
Binding Sites: 2fo1_B
2fo1_C
			
Publications: Wilson J.J, Kovall R.A. Crystal structure of the CSL-Notch-Mastermind ternary complex bound to DNA. Cell 124:985-96 (2006). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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