DNA Binding Motif
Accessions: | MA0137.3 (JASPAR 2024) |
Names: | STAT1 |
Organisms: | Homo sapiens |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Notes: | ChIP-seq |
Length: | 11 |
Consensus: | tTTCyrGGAAa |
Weblogo: | |
PSSM: | P0 A C G T 01 366 731 785 1747 t 02 0 52 0 3577 T 03 0 6 110 3513 T 04 361 3262 6 0 C 05 109 2009 0 1511 y 06 1739 0 1637 253 r 07 163 0 3466 0 G 08 29 7 3426 167 G 09 3620 0 9 0 A 10 3624 5 0 0 A 11 1879 311 725 714 a |
Type: | Heterodimer |
Binding TFs: | P42224 (SH2 domain, STAT protein, all-alpha domain, STAT protein, DNA binding domain, STAT protein, protein interaction domain, STAT1 TAZ2 binding domain) P42224 |
Binding Sites: | MA0137.3.1 MA0137.3.10 MA0137.3.11 / MA0137.3.19 MA0137.3.12 MA0137.3.13 MA0137.3.14 / MA0137.3.16 MA0137.3.15 MA0137.3.17 MA0137.3.18 MA0137.3.2 MA0137.3.20 MA0137.3.3 MA0137.3.4 MA0137.3.5 MA0137.3.6 MA0137.3.7 MA0137.3.8 MA0137.3.9 |
Publications: | Robertson G, Hirst M, Bainbridge M, Bilenky M, Zhao Y, Zeng T, Euskirchen G, Bernier B, Varhol R, Delaney A, Thiessen N, Griffith O.L, He A, Marra M, Snyder M, Jones S. Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing. Nature methods 4:651-7 (2007). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.