DNA Binding Motif

Accessions: 1a1l_A (3D-footprint 20210203)
Names: PROTEIN (ZIF268 ZINC FINGER PEPTIDE)
Organisms: Mus musculus
Libraries: 3D-footprint 20210203 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)
Length: 8
Consensus: GCCCaCGC
Weblogo:
PSSM: P0 A C G T
01 19 0 76 1 G
02 0 96 0 0 C
03 0 96 0 0 C
04 0 96 0 0 C
05 38 20 19 19 a
06 0 96 0 0 C
07 0 0 96 0 G
08 0 96 0 0 C
Binding TFs: 1a1l_A (C2H2-type zinc finger, Zinc finger, C2H2 type, Zinc-finger double domain)
Binding Sites: 1a1l_B
1a1l_C
Publications: Elrod-Erickson M, Benson T.E, Pabo C.O. High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition. Structure (London, England : 1993) 6:451-64 (1998). [Pubmed]

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