DNA Binding Motif

						

			
Accessions: E2Fc (Athamap 20091028), E2Fd (Athamap 20091028)

			
Names: E2Fc, E2Fd
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 11
Consensus: TTCCCGCcmww
Weblogo: 
PSSM: P0      A      C      G      T
01      1      0      0      4      T
02      1      0      0      4      T
03      0      5      0      0      C
04      0      4      1      0      C
05      0      5      0      0      C
06      0      0      5      0      G
07      0      5      0      0      C
08      0      3      1      1      c
09      3      2      0      0      m
10      3      0      0      2      w
11      3      0      0      2      w
Type: Heterodimer
Binding TFs: E2Fd (E2F/DP family winged-helix DNA-binding domain)
E2Fc (E2F/DP family winged-helix DNA-binding domain)
Binding Sites: E2Fc_1 / E2Fd_1
E2Fc_2 / E2Fd_2
E2Fc_3 / E2Fd_3
E2Fc_4 / E2Fd_4
E2Fc_5 / E2Fd_5
			
Publications: Mariconti L, Pellegrini B, Cantoni R, Stevens R, Bergounioux C, Cella R, Albani D. 2002. The E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. J Biol Chem. 277:9911-9. [Pubmed]


 Egelkrout EM, Mariconti L, Settlage SB, Cella R, Robertson D, Hanley-Bowdoin L. 2002. Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development. Plant Cell. 14:3225-36. [Pubmed]


 Stevens R, Mariconti L, Rossignol P, Perennes C, Cella R, Bergounioux C. 2002. Two E2F sites in the Arabidopsis MCM3 promoter have different roles in cell cycle activation and meristematic expression. J Biol Chem. 277:32978-84. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.