DNA Binding Motif

						

			
Accessions: IclR (RegulonDB 7.5)

			
Names: IclR, IclR transcriptional repressor
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 7
Consensus: TTTtcAT
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     10      T
02      1      0      0      9      T
03      0      1      0      9      T
04      0      2      2      6      t
05      1      5      2      2      c
06      9      0      1      0      A
07      0      2      0      8      T
Binding TFs: ECK120004960 (Bacterial transcriptional regulator, IclR helix-turn-helix domain)
Binding Sites: ECK120012593
ECK120016618
ECK120016620
ECK120016622
ECK120016624
ECK120016626
ECK120016628
ECK120016630
			
	
			


			

				

				
				
				
				

			

			

		

	
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