DNA Binding Motif

						

			
Accessions: MA0973.1 (JASPAR 2024)

			
Names: CDF2
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: maWAAAGyrh
Weblogo: 
PSSM: P0      A      C      G      T
01    334    284    235    148      m
02    608     92    150    150      a
03    693     16     41    250      W
04    980     10      4      5      A
05    979     10      2      9      A
06    868     29     81     22      A
07     17      7    969      6      G
08     53    295    154    498      y
09    328     77    395    200      r
10    299    282    155    264      h
Type: Heterodimer
Binding TFs: Q93ZL5 (Dof domain, zinc finger)
Q93ZL5
			
Publications: Iratni R, Baeza L, Andreeva A, Mache R, Lerbs-Mache S. Regulation of rDNA transcription in chloroplasts: promoter exclusion by constitutive repression. Genes Dev 8:2928-38 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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