DNA Binding Motif

Accessions: MA0007.1 (JASPAR 2024)
Names: Ar
Organisms: Rattus rattus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 22
Consensus: hwwrGmACryyvtGTwCchrms
Weblogo:
PSSM: P0 A C G T
01 9 7 2 6 h
02 9 2 3 10 w
03 11 3 3 7 w
04 16 1 7 0 r
05 0 0 22 2 G
06 12 6 1 5 m
07 21 2 0 1 A
08 0 24 0 0 C
09 15 0 8 1 r
10 4 9 2 9 y
11 5 11 2 6 y
12 6 9 9 0 v
13 3 5 1 15 t
14 0 0 24 0 G
15 4 0 0 20 T
16 11 5 1 7 w
17 1 22 1 0 C
18 3 16 1 4 c
19 6 7 5 6 h
20 6 5 9 4 r
21 10 11 0 3 m
22 5 11 6 2 s
Type: Heterodimer
Binding TFs: P15207 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains), Androgen receptor)
P15207
Binding Sites: MA0007.1.1
MA0007.1.10
MA0007.1.11
MA0007.1.12
MA0007.1.13
MA0007.1.14
MA0007.1.15
MA0007.1.16
MA0007.1.17
MA0007.1.18
MA0007.1.19
MA0007.1.2
MA0007.1.20
MA0007.1.3
MA0007.1.4
MA0007.1.5
MA0007.1.6
MA0007.1.7
MA0007.1.8
MA0007.1.9
Publications: Roche P. J., Hoare S. A., Parker M. G. A consensus DNA-binding site for the androgen receptor. Mol. Endocrinol. 6:2229-2235 (1992). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.