DNA Binding Motif
| Accessions: | MA1405.1 (JASPAR 2024) |
| Names: | SIZF2 |
| Organisms: | Solanum lycopersicum |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | PBM |
| Length: | 10 |
| Consensus: | gACTGwCAGT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 16191 20703 39343 23762 g 02 88380 627 8331 2662 A 03 264 78711 20496 530 C 04 3329 918 1251 94502 T 05 7440 2953 88717 889 G 06 63395 4073 4720 27813 w 07 889 88717 2953 7440 C 08 94502 1251 918 3329 A 09 530 20496 78711 264 G 10 2662 8331 627 88380 T |
| Type: | Heterodimer |
| Binding TFs: | I3NN78 (C2H2-type zinc finger, C2H2-type zinc finger) I3NN78 |
| Publications: | Kubo Ki, Sakamoto A, Kobayashi A, Rybka Z, Kanno Y, Nakagawa H, Takatsuji H. Cys2/His2 zinc-finger protein family of petunia: evolution and general mechanism of target-sequence recognition. Nucleic Acids Res 26:608-15 (1998). [Pubmed] |
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