DNA Binding Motif
| Accessions: | TFE3_DBD (HumanTF 1.0), MA0831.1 (JASPAR 2024) |
| Names: | TFE3 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF 1.0 1, JASPAR 2024 2 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | Site type: dimeric; SELEX cycle: 2, HT-SELEX |
| Length: | 10 |
| Consensus: | ryCACGTGay |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 6146 3182 3859 1273 r 02 2392 3848 2691 5529 y 03 0 14460 8 0 C 04 14460 1250 923 1700 A 05 0 14460 160 1504 C 06 2835 630 14460 0 G 07 2182 1267 551 14460 T 08 0 43 14460 130 G 09 8697 3186 1501 1076 a 10 1528 7477 1461 3994 y |
| Type: | Heterodimer |
| Binding TFs: | TFE3_DBD (Helix-loop-helix DNA-binding domain) P19532 (Helix-loop-helix DNA-binding domain, Domain of unknown function (DUF3371)) P19532 |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] Zhang L, Yu H, Wang P, Ding Q, Wang Z. Screening of transcription factors with transcriptional initiation activity. Gene 531:64-70 (2013). [Pubmed] |
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