DNA Binding Motif

						

			
Accessions: POL003.1 (JASPAR 2024)

			
Names: GC-box
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 14
Consensus: wrgGGGcGGrGyyk
Weblogo: 
PSSM: P0      A      C      G      T
01    102     40     50     82      w
02     97     31    112     34      r
03     50      6    154     64      g
04     67      1    206      0      G
05      0      0    274      0      G
06      2      0    272      0      G
07     54    170      0     50      c
08     46      1    224      3      G
09      1      3    222     48      G
10     79      0    171     24      r
11     23     17    192     42      G
12      0    166     35     73      y
13     20     86     52    116      y
14     40     24    109    101      k
			
Publications: Bucher P. Weight matrix descriptions of four eukaryotic RNA polymerase II promoter elements derived from 502 unrelated promoter sequences. J. Mol. Biol. 212:563-578 (1990). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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