DNA Binding Motif

Accessions: AtMYB121_I (AthaMYB 1.0), AtMYB20_I (AthaMYB 1.0), AtMYB34_I (AthaMYB 1.0)
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Length: 8
Consensus: dwhWGTTr
Weblogo:
PSSM: P0 A C G T
01 2 0 1 1 d
02 2 0 0 2 w
03 1 2 0 1 h
04 3 0 0 1 W
05 0 0 4 0 G
06 0 0 0 4 T
07 0 0 0 4 T
08 2 0 2 0 r
Type: Heterodimer
Binding TFs: AtMYB121 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB20 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
AtMYB34 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Binding Sites: AAAAGTTA
ATTAGTTG
GTCAGTTA
TACTGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

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